Abyss¶
ABySS, Assembly By Short Sequences, is a de novo sequence assembler that is designed for short reads.
Details¶
Two versions are available in Galaxy:
- ABySS
- assembles short unpaired reads.
- ABySS paired-end
- assembles short paired reads.
References¶
ABySS: A parallel assembler for short read sequence data.
J.T. Simpson, K. Wong, S.D. Jackman, J.E. Schein, S.J. Jones, I. Birol.
Genome Research, 2009 June; 19(6): 1117-1123.